Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.66■□□□□ 0.74
Stra6O70491 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Stra6O70491 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.66■□□□□ 0.74
Stra6O70491 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stra6O70491 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stra6O70491 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stra6O70491 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.65■□□□□ 0.74
Stra6O70491 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.65■□□□□ 0.74
Stra6O70491 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Stra6O70491 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Stra6O70491 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stra6O70491 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Stra6O70491 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stra6O70491 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stra6O70491 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stra6O70491 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Stra6O70491 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Stra6O70491 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.64■□□□□ 0.73
Stra6O70491 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.64■□□□□ 0.73
Stra6O70491 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Stra6O70491 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Stra6O70491 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stra6O70491 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Stra6O70491 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.63■□□□□ 0.73
Stra6O70491 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Gm45058-201ENSMUST00000205810 766 ntBASIC19.63■□□□□ 0.73
Stra6O70491 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stra6O70491 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Stra6O70491 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.62■□□□□ 0.73
Stra6O70491 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Stra6O70491 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stra6O70491 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.62■□□□□ 0.73
Stra6O70491 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Gm24841-201ENSMUST00000158676 357 ntBASIC19.61■□□□□ 0.73
Stra6O70491 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Stra6O70491 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Stra6O70491 Gm18032-201ENSMUST00000222541 538 ntBASIC19.61■□□□□ 0.73
Stra6O70491 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Stra6O70491 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Stra6O70491 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra6O70491 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.6■□□□□ 0.73
Stra6O70491 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.6■□□□□ 0.73
Stra6O70491 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stra6O70491 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms