Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pknox1O70477 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pknox1O70477 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pknox1O70477 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Pknox1O70477 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.65■□□□□ 0.42
Pknox1O70477 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pknox1O70477 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pknox1O70477 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.65■□□□□ 0.42
Pknox1O70477 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.65■□□□□ 0.42
Pknox1O70477 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pknox1O70477 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.64■□□□□ 0.41
Pknox1O70477 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pknox1O70477 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pknox1O70477 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pknox1O70477 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pknox1O70477 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.64■□□□□ 0.41
Pknox1O70477 Gm7290-201ENSMUST00000104990 617 ntBASIC17.64■□□□□ 0.41
Pknox1O70477 Gm12918-201ENSMUST00000120234 636 ntBASIC17.64■□□□□ 0.41
Pknox1O70477 Gm15710-201ENSMUST00000121821 636 ntBASIC17.64■□□□□ 0.41
Pknox1O70477 Gm5075-201ENSMUST00000196916 622 ntBASIC17.64■□□□□ 0.41
Pknox1O70477 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pknox1O70477 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.64■□□□□ 0.41
Pknox1O70477 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.64■□□□□ 0.41
Pknox1O70477 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pknox1O70477 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pknox1O70477 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pknox1O70477 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pknox1O70477 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pknox1O70477 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.63■□□□□ 0.41
Pknox1O70477 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.63■□□□□ 0.41
Pknox1O70477 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.63■□□□□ 0.41
Pknox1O70477 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pknox1O70477 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pknox1O70477 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pknox1O70477 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.62■□□□□ 0.41
Pknox1O70477 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pknox1O70477 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.62■□□□□ 0.41
Pknox1O70477 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Pknox1O70477 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pknox1O70477 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pknox1O70477 Gm26571-201ENSMUST00000181399 666 ntBASIC17.61■□□□□ 0.41
Pknox1O70477 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.61■□□□□ 0.41
Pknox1O70477 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.61■□□□□ 0.41
Pknox1O70477 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pknox1O70477 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.61■□□□□ 0.41
Pknox1O70477 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pknox1O70477 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pknox1O70477 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.61■□□□□ 0.41
Pknox1O70477 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.61■□□□□ 0.41
Pknox1O70477 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pknox1O70477 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pknox1O70477 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pknox1O70477 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.6■□□□□ 0.41
Pknox1O70477 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pknox1O70477 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pknox1O70477 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pknox1O70477 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pknox1O70477 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms