Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Idnk-204ENSMUST00000226010 1898 ntBASIC16.14■□□□□ 0.17
Pdlim3O70209 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pdlim3O70209 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.13■□□□□ 0.17
Pdlim3O70209 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.13■□□□□ 0.17
Pdlim3O70209 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim3O70209 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim3O70209 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pdlim3O70209 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim3O70209 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.11■□□□□ 0.17
Pdlim3O70209 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pdlim3O70209 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.11■□□□□ 0.17
Pdlim3O70209 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pdlim3O70209 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pdlim3O70209 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Pdlim3O70209 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim3O70209 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pdlim3O70209 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pdlim3O70209 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.1■□□□□ 0.17
Pdlim3O70209 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pdlim3O70209 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.1■□□□□ 0.17
Pdlim3O70209 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 Gm13234-201ENSMUST00000120010 747 ntBASIC16.1■□□□□ 0.17
Pdlim3O70209 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.1■□□□□ 0.17
Pdlim3O70209 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.1■□□□□ 0.17
Pdlim3O70209 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pdlim3O70209 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.1■□□□□ 0.17
Pdlim3O70209 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim3O70209 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.09■□□□□ 0.17
Pdlim3O70209 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Pdlim3O70209 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.09■□□□□ 0.17
Pdlim3O70209 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.09■□□□□ 0.17
Pdlim3O70209 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pdlim3O70209 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
Pdlim3O70209 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pdlim3O70209 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pdlim3O70209 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.09■□□□□ 0.17
Pdlim3O70209 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim3O70209 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim3O70209 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pdlim3O70209 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms