Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pja1O55176 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pja1O55176 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.78■□□□□ 0.6
Pja1O55176 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pja1O55176 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Pja1O55176 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pja1O55176 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pja1O55176 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pja1O55176 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pja1O55176 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja1O55176 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja1O55176 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja1O55176 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja1O55176 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pja1O55176 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pja1O55176 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pja1O55176 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pja1O55176 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.76■□□□□ 0.59
Pja1O55176 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pja1O55176 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pja1O55176 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.75■□□□□ 0.59
Pja1O55176 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.75■□□□□ 0.59
Pja1O55176 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pja1O55176 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.75■□□□□ 0.59
Pja1O55176 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pja1O55176 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.74■□□□□ 0.59
Pja1O55176 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Pja1O55176 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.74■□□□□ 0.59
Pja1O55176 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.74■□□□□ 0.59
Pja1O55176 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Pja1O55176 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.74■□□□□ 0.59
Pja1O55176 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pja1O55176 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pja1O55176 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pja1O55176 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pja1O55176 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.73■□□□□ 0.59
Pja1O55176 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pja1O55176 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.73■□□□□ 0.59
Pja1O55176 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.73■□□□□ 0.59
Pja1O55176 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.73■□□□□ 0.59
Pja1O55176 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.73■□□□□ 0.59
Pja1O55176 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pja1O55176 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms