Protein–RNA interactions for Protein: O55112

Aff2, AF4/FMR2 family member 2, mousemouse

Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff2O55112 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Aff2O55112 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Aff2O55112 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.17■□□□□ 0.34
Aff2O55112 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Aff2O55112 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Aff2O55112 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Aff2O55112 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Aff2O55112 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.16■□□□□ 0.34
Aff2O55112 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Aff2O55112 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Aff2O55112 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Aff2O55112 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Aff2O55112 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Aff2O55112 Gm44549-201ENSMUST00000208351 577 ntBASIC17.15■□□□□ 0.34
Aff2O55112 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.15■□□□□ 0.34
Aff2O55112 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.15■□□□□ 0.34
Aff2O55112 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.15■□□□□ 0.34
Aff2O55112 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Aff2O55112 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Aff2O55112 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aff2O55112 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aff2O55112 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.14■□□□□ 0.33
Aff2O55112 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.14■□□□□ 0.33
Aff2O55112 Gm22325-201ENSMUST00000158904 308 ntBASIC17.14■□□□□ 0.33
Aff2O55112 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Aff2O55112 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.14■□□□□ 0.33
Aff2O55112 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aff2O55112 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aff2O55112 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Aff2O55112 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.14■□□□□ 0.33
Aff2O55112 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Aff2O55112 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Aff2O55112 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.13■□□□□ 0.33
Aff2O55112 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Aff2O55112 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Aff2O55112 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Aff2O55112 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aff2O55112 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.12■□□□□ 0.33
Aff2O55112 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.12■□□□□ 0.33
Aff2O55112 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aff2O55112 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.11■□□□□ 0.33
Aff2O55112 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Gm20049-201ENSMUST00000219950 730 ntBASIC17.11■□□□□ 0.33
Aff2O55112 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aff2O55112 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms