Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.63■□□□□ 0.73
Prom1O54990 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.63■□□□□ 0.73
Prom1O54990 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Gm7791-201ENSMUST00000219066 539 ntBASIC19.63■□□□□ 0.73
Prom1O54990 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prom1O54990 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Prom1O54990 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.63■□□□□ 0.73
Prom1O54990 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.62■□□□□ 0.73
Prom1O54990 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.62■□□□□ 0.73
Prom1O54990 Gm7638-201ENSMUST00000121348 967 ntBASIC19.62■□□□□ 0.73
Prom1O54990 Gm22697-201ENSMUST00000175194 63 ntBASIC19.62■□□□□ 0.73
Prom1O54990 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.62■□□□□ 0.73
Prom1O54990 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Prom1O54990 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Prom1O54990 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prom1O54990 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.61■□□□□ 0.73
Prom1O54990 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Gm24841-201ENSMUST00000158676 357 ntBASIC19.61■□□□□ 0.73
Prom1O54990 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
Prom1O54990 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.61■□□□□ 0.73
Prom1O54990 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prom1O54990 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.6■□□□□ 0.73
Prom1O54990 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Prom1O54990 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Gm33142-201ENSMUST00000193913 867 ntBASIC19.6■□□□□ 0.73
Prom1O54990 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.6■□□□□ 0.73
Prom1O54990 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Prom1O54990 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prom1O54990 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Prom1O54990 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Prom1O54990 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.59■□□□□ 0.73
Prom1O54990 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.59■□□□□ 0.73
Prom1O54990 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prom1O54990 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prom1O54990 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Prom1O54990 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prom1O54990 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.58■□□□□ 0.72
Prom1O54990 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.57■□□□□ 0.72
Prom1O54990 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.57■□□□□ 0.72
Prom1O54990 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.57■□□□□ 0.72
Prom1O54990 Gm18101-201ENSMUST00000215769 548 ntBASIC19.57■□□□□ 0.72
Prom1O54990 Gm7370-201ENSMUST00000219471 767 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms