Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptlc1O35704 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sptlc1O35704 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptlc1O35704 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptlc1O35704 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.4■□□□□ 0.7
Sptlc1O35704 Gm13401-201ENSMUST00000117074 291 ntBASIC19.4■□□□□ 0.7
Sptlc1O35704 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sptlc1O35704 Gm45058-201ENSMUST00000205810 766 ntBASIC19.4■□□□□ 0.7
Sptlc1O35704 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.4■□□□□ 0.7
Sptlc1O35704 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptlc1O35704 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sptlc1O35704 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sptlc1O35704 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sptlc1O35704 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sptlc1O35704 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptlc1O35704 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sptlc1O35704 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Sptlc1O35704 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.39■□□□□ 0.7
Sptlc1O35704 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Sptlc1O35704 Gm18032-201ENSMUST00000222541 538 ntBASIC19.39■□□□□ 0.69
Sptlc1O35704 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sptlc1O35704 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sptlc1O35704 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.39■□□□□ 0.69
Sptlc1O35704 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.39■□□□□ 0.69
Sptlc1O35704 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.39■□□□□ 0.69
Sptlc1O35704 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Sptlc1O35704 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptlc1O35704 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.39■□□□□ 0.69
Sptlc1O35704 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.38■□□□□ 0.69
Sptlc1O35704 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptlc1O35704 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.37■□□□□ 0.69
Sptlc1O35704 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sptlc1O35704 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.37■□□□□ 0.69
Sptlc1O35704 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sptlc1O35704 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sptlc1O35704 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sptlc1O35704 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.37■□□□□ 0.69
Sptlc1O35704 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptlc1O35704 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC19.36■□□□□ 0.69
Sptlc1O35704 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.36■□□□□ 0.69
Sptlc1O35704 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.36■□□□□ 0.69
Sptlc1O35704 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sptlc1O35704 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptlc1O35704 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.35■□□□□ 0.69
Sptlc1O35704 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.35■□□□□ 0.69
Sptlc1O35704 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.35■□□□□ 0.69
Sptlc1O35704 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.35■□□□□ 0.69
Sptlc1O35704 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sptlc1O35704 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sptlc1O35704 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Sptlc1O35704 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sptlc1O35704 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.35■□□□□ 0.69
Sptlc1O35704 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sptlc1O35704 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptlc1O35704 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptlc1O35704 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms