Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.75■□□□□ 0.43
Phox2bO35690 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Phox2bO35690 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Phox2bO35690 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.74■□□□□ 0.43
Phox2bO35690 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.74■□□□□ 0.43
Phox2bO35690 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phox2bO35690 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.73■□□□□ 0.43
Phox2bO35690 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Phox2bO35690 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phox2bO35690 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phox2bO35690 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Phox2bO35690 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Phox2bO35690 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Phox2bO35690 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.73■□□□□ 0.43
Phox2bO35690 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.73■□□□□ 0.43
Phox2bO35690 Gm5587-201ENSMUST00000206270 674 ntBASIC17.73■□□□□ 0.43
Phox2bO35690 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.73■□□□□ 0.43
Phox2bO35690 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.73■□□□□ 0.43
Phox2bO35690 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Phox2bO35690 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.73■□□□□ 0.43
Phox2bO35690 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phox2bO35690 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Phox2bO35690 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.73■□□□□ 0.43
Phox2bO35690 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.73■□□□□ 0.43
Phox2bO35690 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Phox2bO35690 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.72■□□□□ 0.43
Phox2bO35690 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.72■□□□□ 0.43
Phox2bO35690 Gm27525-201ENSMUST00000184465 107 ntBASIC17.72■□□□□ 0.43
Phox2bO35690 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.72■□□□□ 0.43
Phox2bO35690 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.72■□□□□ 0.43
Phox2bO35690 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.72■□□□□ 0.43
Phox2bO35690 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Phox2bO35690 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Phox2bO35690 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.71■□□□□ 0.43
Phox2bO35690 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 AC073947.1-201ENSMUST00000216991 649 ntBASIC17.71■□□□□ 0.43
Phox2bO35690 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.71■□□□□ 0.43
Phox2bO35690 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Phox2bO35690 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Phox2bO35690 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Phox2bO35690 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.7■□□□□ 0.42
Phox2bO35690 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Phox2bO35690 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.7■□□□□ 0.42
Phox2bO35690 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.7■□□□□ 0.42
Phox2bO35690 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Gm17808-201ENSMUST00000200859 894 ntBASIC17.7■□□□□ 0.42
Phox2bO35690 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.7■□□□□ 0.42
Phox2bO35690 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Phox2bO35690 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms