Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Npc1O35604 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
Npc1O35604 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Npc1O35604 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Npc1O35604 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Npc1O35604 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.31■□□□□ 0.36
Npc1O35604 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.31■□□□□ 0.36
Npc1O35604 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Npc1O35604 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Npc1O35604 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Npc1O35604 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Gm15375-201ENSMUST00000119510 849 ntBASIC17.3■□□□□ 0.36
Npc1O35604 Gm6576-201ENSMUST00000169678 883 ntBASIC17.3■□□□□ 0.36
Npc1O35604 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.3■□□□□ 0.36
Npc1O35604 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Npc1O35604 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.3■□□□□ 0.36
Npc1O35604 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Npc1O35604 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Npc1O35604 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.29■□□□□ 0.36
Npc1O35604 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.29■□□□□ 0.36
Npc1O35604 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.29■□□□□ 0.36
Npc1O35604 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.29■□□□□ 0.36
Npc1O35604 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.29■□□□□ 0.36
Npc1O35604 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Npc1O35604 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Npc1O35604 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Npc1O35604 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Npc1O35604 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Npc1O35604 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Npc1O35604 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Npc1O35604 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.28■□□□□ 0.36
Npc1O35604 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.28■□□□□ 0.36
Npc1O35604 Gm10698-201ENSMUST00000182663 604 ntBASIC17.28■□□□□ 0.36
Npc1O35604 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.28■□□□□ 0.36
Npc1O35604 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.28■□□□□ 0.36
Npc1O35604 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.28■□□□□ 0.36
Npc1O35604 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Npc1O35604 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Npc1O35604 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.27■□□□□ 0.36
Npc1O35604 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Npc1O35604 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.27■□□□□ 0.35
Npc1O35604 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Npc1O35604 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Npc1O35604 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Npc1O35604 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Npc1O35604 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Npc1O35604 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.26■□□□□ 0.35
Npc1O35604 Fst-202ENSMUST00000223640 2612 ntBASIC17.26■□□□□ 0.35
Npc1O35604 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Npc1O35604 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms