Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Abca4O35600 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.73■□□□□ 0.27
Abca4O35600 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca4O35600 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Abca4O35600 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Abca4O35600 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Abca4O35600 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.72■□□□□ 0.27
Abca4O35600 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.72■□□□□ 0.27
Abca4O35600 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca4O35600 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.72■□□□□ 0.27
Abca4O35600 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Abca4O35600 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Abca4O35600 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.71■□□□□ 0.27
Abca4O35600 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.71■□□□□ 0.27
Abca4O35600 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Gm4995-201ENSMUST00000117247 432 ntBASIC16.71■□□□□ 0.27
Abca4O35600 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca4O35600 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Abca4O35600 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Abca4O35600 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.7■□□□□ 0.26
Abca4O35600 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.7■□□□□ 0.26
Abca4O35600 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.7■□□□□ 0.26
Abca4O35600 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.7■□□□□ 0.26
Abca4O35600 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Gm15372-201ENSMUST00000120729 834 ntBASIC16.7■□□□□ 0.26
Abca4O35600 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Abca4O35600 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.7■□□□□ 0.26
Abca4O35600 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca4O35600 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.69■□□□□ 0.26
Abca4O35600 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.69■□□□□ 0.26
Abca4O35600 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.69■□□□□ 0.26
Abca4O35600 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Abca4O35600 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.69■□□□□ 0.26
Abca4O35600 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Gm13401-201ENSMUST00000117074 291 ntBASIC16.69■□□□□ 0.26
Abca4O35600 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Gm15920-201ENSMUST00000118998 402 ntBASIC16.69■□□□□ 0.26
Abca4O35600 Mir5131-201ENSMUST00000175426 93 ntBASIC16.69■□□□□ 0.26
Abca4O35600 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Abca4O35600 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca4O35600 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Abca4O35600 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca4O35600 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Abca4O35600 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abca4O35600 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca4O35600 Gm44357-201ENSMUST00000195897 142 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm19658-201ENSMUST00000196231 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44367-201ENSMUST00000196836 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44350-201ENSMUST00000197197 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44390-201ENSMUST00000197533 144 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44313-201ENSMUST00000198018 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44486-201ENSMUST00000198508 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44454-201ENSMUST00000198541 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44314-201ENSMUST00000199263 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44394-201ENSMUST00000199558 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44484-201ENSMUST00000199873 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44466-201ENSMUST00000200264 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm44359-201ENSMUST00000200671 138 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.68■□□□□ 0.26
Abca4O35600 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms