Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptch2O35595 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ptch2O35595 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptch2O35595 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptch2O35595 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.19■□□□□ 0.5
Ptch2O35595 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Ptch2O35595 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ptch2O35595 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptch2O35595 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.18■□□□□ 0.5
Ptch2O35595 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.18■□□□□ 0.5
Ptch2O35595 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ptch2O35595 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.18■□□□□ 0.5
Ptch2O35595 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.18■□□□□ 0.5
Ptch2O35595 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ptch2O35595 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ptch2O35595 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptch2O35595 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ptch2O35595 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.17■□□□□ 0.5
Ptch2O35595 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.17■□□□□ 0.5
Ptch2O35595 Gm10517-202ENSMUST00000192970 758 ntBASIC18.17■□□□□ 0.5
Ptch2O35595 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.17■□□□□ 0.5
Ptch2O35595 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ptch2O35595 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptch2O35595 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ptch2O35595 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptch2O35595 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptch2O35595 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ptch2O35595 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptch2O35595 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ptch2O35595 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptch2O35595 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptch2O35595 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.16■□□□□ 0.5
Ptch2O35595 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.15■□□□□ 0.5
Ptch2O35595 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ptch2O35595 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Ptch2O35595 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ptch2O35595 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.15■□□□□ 0.5
Ptch2O35595 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Ptch2O35595 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.15■□□□□ 0.5
Ptch2O35595 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptch2O35595 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptch2O35595 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptch2O35595 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Ptch2O35595 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.14■□□□□ 0.5
Ptch2O35595 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.14■□□□□ 0.5
Ptch2O35595 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ptch2O35595 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ptch2O35595 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.14■□□□□ 0.49
Ptch2O35595 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ptch2O35595 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms