Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clcn6O35454 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.84■□□□□ 0.61
Clcn6O35454 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.84■□□□□ 0.61
Clcn6O35454 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clcn6O35454 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn6O35454 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn6O35454 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn6O35454 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn6O35454 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC18.83■□□□□ 0.6
Clcn6O35454 Gm42642-201ENSMUST00000200683 355 ntBASIC18.83■□□□□ 0.6
Clcn6O35454 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Clcn6O35454 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn6O35454 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clcn6O35454 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn6O35454 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Clcn6O35454 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clcn6O35454 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.81■□□□□ 0.6
Clcn6O35454 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clcn6O35454 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 AC154849.3-201ENSMUST00000223733 1660 ntBASIC18.81■□□□□ 0.6
Clcn6O35454 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn6O35454 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn6O35454 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clcn6O35454 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clcn6O35454 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn6O35454 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn6O35454 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn6O35454 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.8■□□□□ 0.6
Clcn6O35454 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn6O35454 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn6O35454 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn6O35454 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Clcn6O35454 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clcn6O35454 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clcn6O35454 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.79■□□□□ 0.6
Clcn6O35454 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clcn6O35454 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.79■□□□□ 0.6
Clcn6O35454 Gm42569-201ENSMUST00000200539 472 ntBASIC18.79■□□□□ 0.6
Clcn6O35454 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC18.79■□□□□ 0.6
Clcn6O35454 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.79■□□□□ 0.6
Clcn6O35454 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Clcn6O35454 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.79■□□□□ 0.6
Clcn6O35454 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Clcn6O35454 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Clcn6O35454 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn6O35454 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clcn6O35454 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clcn6O35454 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.78■□□□□ 0.6
Clcn6O35454 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Clcn6O35454 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn6O35454 Gm14776-201ENSMUST00000121029 887 ntBASIC18.78■□□□□ 0.6
Clcn6O35454 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms