Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11bO08712 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11bO08712 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Gm44549-201ENSMUST00000208351 577 ntBASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11bO08712 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Gm13148-201ENSMUST00000118892 745 ntBASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11bO08712 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf11bO08712 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf11bO08712 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf11bO08712 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf11bO08712 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf11bO08712 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Zfp783-201ENSMUST00000095946 670 ntBASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.01■□□□□ 0.47
Tnfrsf11bO08712 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Gm27405-201ENSMUST00000184201 112 ntBASIC18■□□□□ 0.47
Tnfrsf11bO08712 Gm26524-201ENSMUST00000192339 390 ntBASIC18■□□□□ 0.47
Tnfrsf11bO08712 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms