Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AlyrefO08583 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AlyrefO08583 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
AlyrefO08583 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
AlyrefO08583 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
AlyrefO08583 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
AlyrefO08583 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
AlyrefO08583 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.89■□□□□ 0.45
AlyrefO08583 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.89■□□□□ 0.45
AlyrefO08583 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.89■□□□□ 0.45
AlyrefO08583 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.89■□□□□ 0.45
AlyrefO08583 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.89■□□□□ 0.45
AlyrefO08583 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
AlyrefO08583 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
AlyrefO08583 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AlyrefO08583 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.89■□□□□ 0.45
AlyrefO08583 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.88■□□□□ 0.45
AlyrefO08583 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.88■□□□□ 0.45
AlyrefO08583 AA386476-201ENSMUST00000098781 1665 ntBASIC17.88■□□□□ 0.45
AlyrefO08583 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.88■□□□□ 0.45
AlyrefO08583 Gm27357-201ENSMUST00000183754 135 ntBASIC17.88■□□□□ 0.45
AlyrefO08583 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.88■□□□□ 0.45
AlyrefO08583 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.88■□□□□ 0.45
AlyrefO08583 Gm7791-201ENSMUST00000219066 539 ntBASIC17.88■□□□□ 0.45
AlyrefO08583 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
AlyrefO08583 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AlyrefO08583 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.88■□□□□ 0.45
AlyrefO08583 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
AlyrefO08583 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Gm43438-201ENSMUST00000198133 379 ntBASIC17.87■□□□□ 0.45
AlyrefO08583 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
AlyrefO08583 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
AlyrefO08583 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.87■□□□□ 0.45
AlyrefO08583 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
AlyrefO08583 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AlyrefO08583 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.86■□□□□ 0.45
AlyrefO08583 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.86■□□□□ 0.45
AlyrefO08583 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AlyrefO08583 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
AlyrefO08583 Gm27389-201ENSMUST00000183622 195 ntBASIC17.86■□□□□ 0.45
AlyrefO08583 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.86■□□□□ 0.45
AlyrefO08583 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.86■□□□□ 0.45
AlyrefO08583 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.86■□□□□ 0.45
AlyrefO08583 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
AlyrefO08583 Gm8587-201ENSMUST00000076538 843 ntBASIC17.86■□□□□ 0.45
AlyrefO08583 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.86■□□□□ 0.45
AlyrefO08583 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
AlyrefO08583 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
AlyrefO08583 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
AlyrefO08583 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
AlyrefO08583 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AlyrefO08583 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AlyrefO08583 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AlyrefO08583 Gm12085-201ENSMUST00000119263 940 ntBASIC17.85■□□□□ 0.45
AlyrefO08583 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AlyrefO08583 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AlyrefO08583 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.85■□□□□ 0.45
AlyrefO08583 Gm21559-201ENSMUST00000220638 855 ntBASIC17.85■□□□□ 0.45
AlyrefO08583 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AlyrefO08583 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AlyrefO08583 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AlyrefO08583 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms