Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Gm28033-201ENSMUST00000184224 96 ntBASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Gm17807-201ENSMUST00000186869 298 ntBASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
B020004C17RikJ3QP07 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
B020004C17RikJ3QP07 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
B020004C17RikJ3QP07 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Gm18669-201ENSMUST00000216049 778 ntBASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
B020004C17RikJ3QP07 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
B020004C17RikJ3QP07 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B020004C17RikJ3QP07 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
B020004C17RikJ3QP07 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
B020004C17RikJ3QP07 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
B020004C17RikJ3QP07 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
B020004C17RikJ3QP07 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
B020004C17RikJ3QP07 Gm26039-201ENSMUST00000158152 144 ntBASIC19.85■□□□□ 0.77
B020004C17RikJ3QP07 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms