Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shisa8J3QNX5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Shisa8J3QNX5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.21■□□□□ 0.18
Shisa8J3QNX5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shisa8J3QNX5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Gm45417-201ENSMUST00000209533 758 ntBASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Reep4-203ENSMUST00000226563 1444 ntBASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shisa8J3QNX5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shisa8J3QNX5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Gm13146-201ENSMUST00000118508 780 ntBASIC16.17■□□□□ 0.18
Shisa8J3QNX5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Gm9988-201ENSMUST00000069786 435 ntBASIC16.17■□□□□ 0.18
Shisa8J3QNX5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms