Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
E030018B13RikJ3QMS9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Gm10517-202ENSMUST00000192970 758 ntBASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.34□□□□□ -0.11
E030018B13RikJ3QMS9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
E030018B13RikJ3QMS9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
E030018B13RikJ3QMS9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
E030018B13RikJ3QMS9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
E030018B13RikJ3QMS9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Gm715-201ENSMUST00000117865 831 ntBASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
E030018B13RikJ3QMS9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
E030018B13RikJ3QMS9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
E030018B13RikJ3QMS9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
E030018B13RikJ3QMS9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms