Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgo2bJ3QMK1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sgo2bJ3QMK1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sgo2bJ3QMK1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgo2bJ3QMK1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Flg-201ENSMUST00000050758 1488 ntBASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sgo2bJ3QMK1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Gm5408-201ENSMUST00000197998 747 ntBASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sgo2bJ3QMK1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sgo2bJ3QMK1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgo2bJ3QMK1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgo2bJ3QMK1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgo2bJ3QMK1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgo2bJ3QMK1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgo2bJ3QMK1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sgo2bJ3QMK1 Gm11927-201ENSMUST00000118472 759 ntBASIC17.66■□□□□ 0.42
Sgo2bJ3QMK1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms