Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm17535J3KMR8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Gm17535J3KMR8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm17535J3KMR8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm17535J3KMR8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm17535J3KMR8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm17535J3KMR8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.92■□□□□ 0.62
Gm17535J3KMR8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm17535J3KMR8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm17535J3KMR8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm17535J3KMR8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm17535J3KMR8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Gm17535J3KMR8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm17535J3KMR8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm17535J3KMR8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm17535J3KMR8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm17535J3KMR8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm17535J3KMR8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm17535J3KMR8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Gm30025-201ENSMUST00000218555 728 ntBASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm17535J3KMR8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Gm38027-201ENSMUST00000192315 235 ntBASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Gm43799-201ENSMUST00000201845 579 ntBASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Gm17535J3KMR8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm17535J3KMR8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm17535J3KMR8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms