Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3tc1G3X9F6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3tc1G3X9F6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3tc1G3X9F6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Sh3tc1G3X9F6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3tc1G3X9F6 Gm27389-201ENSMUST00000183622 195 ntBASIC21.52■■□□□ 1.03
Sh3tc1G3X9F6 Gm21559-201ENSMUST00000220638 855 ntBASIC21.52■■□□□ 1.03
Sh3tc1G3X9F6 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.52■■□□□ 1.03
Sh3tc1G3X9F6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sh3tc1G3X9F6 Gm8587-201ENSMUST00000076538 843 ntBASIC21.52■■□□□ 1.03
Sh3tc1G3X9F6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.52■■□□□ 1.03
Sh3tc1G3X9F6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Sh3tc1G3X9F6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Gm17661-201ENSMUST00000170317 270 ntBASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Gm9731-201ENSMUST00000209480 747 ntBASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3tc1G3X9F6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Mir1668-201ENSMUST00000184114 107 ntBASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3tc1G3X9F6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3tc1G3X9F6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Gm37025-201ENSMUST00000195159 829 ntBASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3tc1G3X9F6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3tc1G3X9F6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Gm5587-201ENSMUST00000206270 674 ntBASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Il3ra-202ENSMUST00000223589 738 ntBASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3tc1G3X9F6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Sh3tc1G3X9F6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms