Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Colca2F8VPY8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Colca2F8VPY8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Gm45328-201ENSMUST00000210942 917 ntBASIC16.9■□□□□ 0.3
Colca2F8VPY8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Colca2F8VPY8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Colca2F8VPY8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Colca2F8VPY8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Colca2F8VPY8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Mir770-201ENSMUST00000103252 94 ntBASIC16.89■□□□□ 0.29
Colca2F8VPY8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Gm37722-201ENSMUST00000193757 208 ntBASIC16.89■□□□□ 0.29
Colca2F8VPY8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Actl10-202ENSMUST00000226583 1501 ntBASIC16.89■□□□□ 0.29
Colca2F8VPY8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Colca2F8VPY8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Gm43514-201ENSMUST00000198852 424 ntBASIC16.88■□□□□ 0.29
Colca2F8VPY8 Gm34391-201ENSMUST00000203706 907 ntBASIC16.88■□□□□ 0.29
Colca2F8VPY8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Tgds-204ENSMUST00000228543 1594 ntBASIC16.88■□□□□ 0.29
Colca2F8VPY8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Colca2F8VPY8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.87■□□□□ 0.29
Colca2F8VPY8 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.87■□□□□ 0.29
Colca2F8VPY8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Colca2F8VPY8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.87■□□□□ 0.29
Colca2F8VPY8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Colca2F8VPY8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Gm6443-201ENSMUST00000203599 874 ntBASIC16.86■□□□□ 0.29
Colca2F8VPY8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Birc2-201ENSMUST00000054878 378 ntBASIC16.86■□□□□ 0.29
Colca2F8VPY8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Colca2F8VPY8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms