Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh9F8VPK8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdh9F8VPK8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Gm37179-201ENSMUST00000194862 823 ntBASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh9F8VPK8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Gm7290-201ENSMUST00000104990 617 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Gm12918-201ENSMUST00000120234 636 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Gm15710-201ENSMUST00000121821 636 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdh9F8VPK8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Gm6211-202ENSMUST00000167849 925 ntBASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Gm38285-201ENSMUST00000192928 922 ntBASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh9F8VPK8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh9F8VPK8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Gm2399-201ENSMUST00000104944 225 ntBASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh9F8VPK8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms