Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh1F7BJK1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh1F7BJK1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh1F7BJK1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh1F7BJK1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdh1F7BJK1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh1F7BJK1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Gm10655-201ENSMUST00000098658 1397 ntBASIC16■□□□□ 0.15
Pcdh1F7BJK1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16■□□□□ 0.15
Pcdh1F7BJK1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16■□□□□ 0.15
Pcdh1F7BJK1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Gm15039-201ENSMUST00000118914 875 ntBASIC16■□□□□ 0.15
Pcdh1F7BJK1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh1F7BJK1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Gm13234-201ENSMUST00000120010 747 ntBASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh1F7BJK1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh1F7BJK1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdh1F7BJK1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh1F7BJK1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh1F7BJK1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh1F7BJK1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh1F7BJK1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms