Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Gm7791-201ENSMUST00000219066 539 ntBASIC21.41■■□□□ 1.02
Ube4aE9Q735 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4aE9Q735 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Gm23634-201ENSMUST00000175071 91 ntBASIC21.4■■□□□ 1.02
Ube4aE9Q735 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ube4aE9Q735 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ube4aE9Q735 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.39■■□□□ 1.02
Ube4aE9Q735 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ube4aE9Q735 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ube4aE9Q735 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.39■■□□□ 1.01
Ube4aE9Q735 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ube4aE9Q735 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.39■■□□□ 1.01
Ube4aE9Q735 Golph3-205ENSMUST00000228671 2842 ntBASIC21.39■■□□□ 1.01
Ube4aE9Q735 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ube4aE9Q735 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Ube4aE9Q735 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Gm16061-201ENSMUST00000122167 857 ntBASIC21.38■■□□□ 1.01
Ube4aE9Q735 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4aE9Q735 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ube4aE9Q735 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4aE9Q735 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.36■■□□□ 1.01
Ube4aE9Q735 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4aE9Q735 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Gm21362-201ENSMUST00000194272 928 ntBASIC21.35■■□□□ 1.01
Ube4aE9Q735 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ube4aE9Q735 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ube4aE9Q735 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ube4aE9Q735 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ube4aE9Q735 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ube4aE9Q735 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ube4aE9Q735 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ube4aE9Q735 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms