Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb9E9Q5G2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb9E9Q5G2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Gm21814-202ENSMUST00000203277 873 ntBASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb9E9Q5G2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Mir6982-201ENSMUST00000184354 68 ntBASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb9E9Q5G2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb9E9Q5G2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb9E9Q5G2 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.89■□□□□ 0.94
Pcdhb9E9Q5G2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb9E9Q5G2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Gm37055-201ENSMUST00000191866 133 ntBASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Gm4974-201ENSMUST00000209974 875 ntBASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb9E9Q5G2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb9E9Q5G2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms