Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a3E9PWQ3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Gm26039-201ENSMUST00000158152 144 ntBASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col6a3E9PWQ3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a3E9PWQ3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Actl10-202ENSMUST00000226583 1501 ntBASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.87■□□□□ 0.45
Col6a3E9PWQ3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a3E9PWQ3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Gm15372-201ENSMUST00000120729 834 ntBASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.85■□□□□ 0.45
Col6a3E9PWQ3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a3E9PWQ3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Col6a3E9PWQ3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Col6a3E9PWQ3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col6a3E9PWQ3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms