Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim30bE9PVL6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Gm24841-201ENSMUST00000158676 357 ntBASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim30bE9PVL6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Gm29791-202ENSMUST00000207888 369 ntBASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim30bE9PVL6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim30bE9PVL6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim30bE9PVL6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Gm7638-201ENSMUST00000121348 967 ntBASIC18.88■□□□□ 0.61
Trim30bE9PVL6 AA414768-201ENSMUST00000121924 1257 ntBASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim30bE9PVL6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Gm7791-201ENSMUST00000219066 539 ntBASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim30bE9PVL6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.87■□□□□ 0.61
Trim30bE9PVL6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms