Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Gm38027-201ENSMUST00000192315 235 ntBASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Dchs1E9PVD3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Dchs1E9PVD3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Gm24589-201ENSMUST00000116692 94 ntBASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Gm7063-201ENSMUST00000186840 981 ntBASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Gm27463-201ENSMUST00000183569 57 ntBASIC15.74■□□□□ 0.11
Dchs1E9PVD3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Dchs1E9PVD3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dchs1E9PVD3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dchs1E9PVD3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gm27525-201ENSMUST00000184465 107 ntBASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gm2274-201ENSMUST00000184539 609 ntBASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gm21559-201ENSMUST00000220638 855 ntBASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gm8587-201ENSMUST00000076538 843 ntBASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gm38285-201ENSMUST00000192928 922 ntBASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Dchs1E9PVD3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Dchs1E9PVD3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Dchs1E9PVD3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Dchs1E9PVD3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.7■□□□□ 0.1
Dchs1E9PVD3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Dchs1E9PVD3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Dchs1E9PVD3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms