Protein–RNA interactions for Protein: E9PV98

Trim5, Tripartite motif-containing 5, mousemouse

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim5E9PV98 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim5E9PV98 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim5E9PV98 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim5E9PV98 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim5E9PV98 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim5E9PV98 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Gm24841-201ENSMUST00000158676 357 ntBASIC19.91■□□□□ 0.78
Trim5E9PV98 Gm28033-201ENSMUST00000184224 96 ntBASIC19.91■□□□□ 0.78
Trim5E9PV98 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim5E9PV98 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim5E9PV98 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim5E9PV98 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim5E9PV98 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Gm9013-201ENSMUST00000132939 882 ntBASIC19.9■□□□□ 0.78
Trim5E9PV98 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim5E9PV98 Gm29518-201ENSMUST00000190858 372 ntBASIC19.9■□□□□ 0.78
Trim5E9PV98 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim5E9PV98 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim5E9PV98 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim5E9PV98 Iqck-206ENSMUST00000208658 2891 ntBASIC19.89■□□□□ 0.78
Trim5E9PV98 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim5E9PV98 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim5E9PV98 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim5E9PV98 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim5E9PV98 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim5E9PV98 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim5E9PV98 Mir1668-201ENSMUST00000184114 107 ntBASIC19.89■□□□□ 0.77
Trim5E9PV98 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.89■□□□□ 0.77
Trim5E9PV98 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim5E9PV98 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim5E9PV98 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim5E9PV98 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Gm17807-201ENSMUST00000186869 298 ntBASIC19.88■□□□□ 0.77
Trim5E9PV98 Gm7461-201ENSMUST00000058918 827 ntBASIC19.88■□□□□ 0.77
Trim5E9PV98 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.88■□□□□ 0.77
Trim5E9PV98 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim5E9PV98 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim5E9PV98 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim5E9PV98 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim5E9PV98 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim5E9PV98 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim5E9PV98 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim5E9PV98 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim5E9PV98 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim5E9PV98 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim5E9PV98 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim5E9PV98 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.86■□□□□ 0.77
Trim5E9PV98 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trim5E9PV98 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Trim5E9PV98 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim5E9PV98 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Trim5E9PV98 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim5E9PV98 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim5E9PV98 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim5E9PV98 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms