Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm5878E9PUB3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm5878E9PUB3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm5878E9PUB3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm5878E9PUB3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm5878E9PUB3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm5878E9PUB3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Gm6211-202ENSMUST00000167849 925 ntBASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm5878E9PUB3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.33□□□□□ -0.27
Gm5878E9PUB3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Mir8112-201ENSMUST00000184382 131 ntBASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Gm44549-201ENSMUST00000208351 577 ntBASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm5878E9PUB3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Flg-201ENSMUST00000050758 1488 ntBASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Gm29791-202ENSMUST00000207888 369 ntBASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5878E9PUB3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5878E9PUB3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms