Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28043E0CXC2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Gm7291-201ENSMUST00000199147 382 ntBASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28043E0CXC2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28043E0CXC2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.78■□□□□ 0.44
Gm28043E0CXC2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28043E0CXC2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28043E0CXC2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28043E0CXC2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms