Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Gm6211-202ENSMUST00000167849 925 ntBASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim30cD3YVI9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim30cD3YVI9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.35■□□□□ 0.69
Trim30cD3YVI9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim30cD3YVI9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim30cD3YVI9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.34■□□□□ 0.69
Trim30cD3YVI9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.34■□□□□ 0.69
Trim30cD3YVI9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim30cD3YVI9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Trim30cD3YVI9 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.33■□□□□ 0.68
Trim30cD3YVI9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim30cD3YVI9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms