Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Gm2274-201ENSMUST00000184539 609 ntBASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Gm18032-201ENSMUST00000222541 538 ntBASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptchd4B9EKX1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptchd4B9EKX1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ptchd4B9EKX1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd4B9EKX1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Mir5130-201ENSMUST00000175160 84 ntBASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd4B9EKX1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Gm7638-201ENSMUST00000121348 967 ntBASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd4B9EKX1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms