Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc38A3KMP2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.33■□□□□ 0.69
Ttc38A3KMP2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ttc38A3KMP2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ttc38A3KMP2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ttc38A3KMP2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.33■□□□□ 0.69
Ttc38A3KMP2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ttc38A3KMP2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc38A3KMP2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc38A3KMP2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Gm27275-201ENSMUST00000184318 272 ntBASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Gm29791-202ENSMUST00000207888 369 ntBASIC19.31■□□□□ 0.68
Ttc38A3KMP2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc38A3KMP2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ttc38A3KMP2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Gm8969-201ENSMUST00000199694 526 ntBASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc38A3KMP2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms