Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.74■□□□□ 0.91
Chd5A2A8L1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.74■□□□□ 0.91
Chd5A2A8L1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd5A2A8L1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.73■□□□□ 0.91
Chd5A2A8L1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd5A2A8L1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd5A2A8L1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Chd5A2A8L1 Fst-202ENSMUST00000223640 2612 ntBASIC20.71■□□□□ 0.91
Chd5A2A8L1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Gm22697-201ENSMUST00000175194 63 ntBASIC20.71■□□□□ 0.91
Chd5A2A8L1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd5A2A8L1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.7■□□□□ 0.91
Chd5A2A8L1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Chd5A2A8L1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Chd5A2A8L1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.7■□□□□ 0.9
Chd5A2A8L1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd5A2A8L1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd5A2A8L1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd5A2A8L1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.69■□□□□ 0.9
Chd5A2A8L1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Gm18958-201ENSMUST00000174258 762 ntBASIC20.68■□□□□ 0.9
Chd5A2A8L1 Gm5587-201ENSMUST00000206270 674 ntBASIC20.68■□□□□ 0.9
Chd5A2A8L1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.68■□□□□ 0.9
Chd5A2A8L1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.68■□□□□ 0.9
Chd5A2A8L1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.68■□□□□ 0.9
Chd5A2A8L1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd5A2A8L1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.67■□□□□ 0.9
Chd5A2A8L1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd5A2A8L1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd5A2A8L1 Gm9013-201ENSMUST00000132939 882 ntBASIC20.67■□□□□ 0.9
Chd5A2A8L1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.67■□□□□ 0.9
Chd5A2A8L1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms