Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3854A0A1B0GSS6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm22697-201ENSMUST00000175194 63 ntBASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm6345-202ENSMUST00000180900 204 ntBASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm18101-201ENSMUST00000215769 548 ntBASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3854A0A1B0GSS6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3854A0A1B0GSS6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3854A0A1B0GSS6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3854A0A1B0GSS6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3854A0A1B0GSS6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Gm33142-201ENSMUST00000193913 867 ntBASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3854A0A1B0GSS6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms