Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Igkv6-25A0A140T8N7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv6-25A0A140T8N7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv6-25A0A140T8N7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Igkv6-25A0A140T8N7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.63■□□□□ 0.25
Igkv6-25A0A140T8N7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.63■□□□□ 0.25
Igkv6-25A0A140T8N7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv6-25A0A140T8N7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv6-25A0A140T8N7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv6-25A0A140T8N7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv6-25A0A140T8N7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm7791-201ENSMUST00000219066 539 ntBASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Igkv6-25A0A140T8N7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv6-25A0A140T8N7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv6-25A0A140T8N7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Igkv6-25A0A140T8N7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Igkv6-25A0A140T8N7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Igkv6-25A0A140T8N7 Gm10013-201ENSMUST00000106074 672 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms