Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-30A0A140T8M3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-30A0A140T8M3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Dancr-204ENSMUST00000132389 2347 ntBASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm15820-201ENSMUST00000201566 728 ntBASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm18755-201ENSMUST00000218030 1099 ntBASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm40881-201ENSMUST00000223397 166 ntBASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-30A0A140T8M3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Igkv8-30A0A140T8M3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms