Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Frmpd3A0A140LIW3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Frmpd3A0A140LIW3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.22■□□□□ 0.99
Frmpd3A0A140LIW3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Gm15794-201ENSMUST00000120182 631 ntBASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Gm6623-201ENSMUST00000173570 544 ntBASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Frmpd3A0A140LIW3 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.2■□□□□ 0.99
Frmpd3A0A140LIW3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Gm27525-201ENSMUST00000184465 107 ntBASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Frmpd3A0A140LIW3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Gm18733-201ENSMUST00000173950 856 ntBASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Gm5864-201ENSMUST00000202263 970 ntBASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Frmpd3A0A140LIW3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Gm45328-201ENSMUST00000210942 917 ntBASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Frmpd3A0A140LIW3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Tgds-204ENSMUST00000228543 1594 ntBASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Frmpd3A0A140LIW3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Frmpd3A0A140LIW3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Frmpd3A0A140LIW3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Frmpd3A0A140LIW3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Frmpd3A0A140LIW3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.16■□□□□ 0.98
Frmpd3A0A140LIW3 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.16■□□□□ 0.98
Frmpd3A0A140LIW3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms