Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Mir2861-201ENSMUST00000175539 82 ntBASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm37055-201ENSMUST00000191866 133 ntBASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn2aA0A0J9YTW6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn2aA0A0J9YTW6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm43183-201ENSMUST00000200632 547 ntBASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn2aA0A0J9YTW6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn2aA0A0J9YTW6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn2aA0A0J9YTW6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn2aA0A0J9YTW6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn2aA0A0J9YTW6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn2aA0A0J9YTW6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn2aA0A0J9YTW6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn2aA0A0J9YTW6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms