Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15710-201ENSMUST00000121821 636 ntBASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38285-201ENSMUST00000192928 922 ntBASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5075-201ENSMUST00000196916 622 ntBASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10849-201ENSMUST00000100397 618 ntBASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6211-202ENSMUST00000167849 925 ntBASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26571-201ENSMUST00000181399 666 ntBASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2399-201ENSMUST00000104944 225 ntBASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18284-201ENSMUST00000172604 624 ntBASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms