Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm43137-201ENSMUST00000198052 594 ntBASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms