Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Tgds-204ENSMUST00000228543 1594 ntBASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Gm43173-201ENSMUST00000202246 593 ntBASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav11A0A0B4J1J9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav11A0A0B4J1J9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Gm8969-201ENSMUST00000199694 526 ntBASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav11A0A0B4J1J9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav11A0A0B4J1J9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav11A0A0B4J1J9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav11A0A0B4J1J9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav11A0A0B4J1J9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav11A0A0B4J1J9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Gm40848-201ENSMUST00000221998 324 ntBASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Gm13241-201ENSMUST00000094493 780 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms