Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm6211-202ENSMUST00000167849 925 ntBASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Idnk-204ENSMUST00000226010 1898 ntBASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv19A0A0B4J1H4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv19A0A0B4J1H4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm8495-201ENSMUST00000188740 694 ntBASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv19A0A0B4J1H4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms