Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm27801-201ENSMUST00000184174 223 ntBASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Spcs1-204ENSMUST00000226782 949 ntBASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv13-3A0A0B4J1H2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms