Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav21-dv12A0A075B6C4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav21-dv12A0A075B6C4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trav21-dv12A0A075B6C4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav21-dv12A0A075B6C4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.63□□□□□ -0.23
Trav21-dv12A0A075B6C4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms