Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.15□□□□□ -0.14
Trav17A0A075B655 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav17A0A075B655 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Gm6139-201ENSMUST00000079261 882 ntBASIC14.14□□□□□ -0.15
Trav17A0A075B655 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.14□□□□□ -0.15
Trav17A0A075B655 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav17A0A075B655 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.13□□□□□ -0.15
Trav17A0A075B655 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.13□□□□□ -0.15
Trav17A0A075B655 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav17A0A075B655 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav17A0A075B655 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms