Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Gm10420-201ENSMUST00000121713 882 ntBASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-4A0A075B654 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-4A0A075B654 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Gm38042-201ENSMUST00000191614 5208 ntBASIC12□□□□□ -0.49
Trav3-4A0A075B654 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-4A0A075B654 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav3-4A0A075B654 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms