Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-1A0A075B644 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Gm11927-201ENSMUST00000118472 759 ntBASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-1A0A075B644 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-1A0A075B644 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms