Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-2A0A075B638 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Gm22325-201ENSMUST00000158904 308 ntBASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-2A0A075B638 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4-2A0A075B638 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.08□□□□□ -0.15
Trav4-2A0A075B638 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4-2A0A075B638 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4-2A0A075B638 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4-2A0A075B638 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-2A0A075B638 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Gm45102-201ENSMUST00000207427 857 ntBASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav4-2A0A075B638 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms